FFCP PHASE2:Hg19::chr13:28543316..28543329,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p4@CDX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_CDX2_5end |
| Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
| Association with transcript: | 0bp_to_NM_001265, uc001urv.2_5end |
| EntrezGene: | CDX2 |
| HGNC: | 1806 |
| UniProt: | Q99626 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@CDX2 |
|---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 3.02e-16 | 4 |
| epithelial cell of large intestine | 5.62e-15 | 2 |
| epithelial cell of alimentary canal | 2.73e-08 | 20 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| intestine | 7.00e-62 | 17 |
| gastrointestinal system | 9.28e-56 | 25 |
| large intestine | 2.96e-39 | 11 |
| lower digestive tract | 2.28e-34 | 5 |
| rectum | 6.46e-28 | 4 |
| colon | 1.87e-27 | 9 |
| small intestine | 7.22e-22 | 4 |
| intestinal mucosa | 3.02e-16 | 4 |
| wall of intestine | 3.02e-16 | 4 |
| gastrointestinal system mucosa | 3.02e-16 | 4 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system cancer | 1.15e-16 | 14 |
| tubular adenocarcinoma | 5.65e-14 | 2 |
| adenocarcinoma | 4.21e-09 | 25 |
| carcinoma | 4.12e-08 | 106 |
| osteosarcoma | 7.59e-08 | 1 |
| skin squamous cell carcinoma | 8.12e-08 | 1 |
| keratoacanthoma | 8.12e-08 | 1 |
| squamous cell carcinoma | 1.19e-07 | 14 |
Showing 1 to 8 of 8 entries
